BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011H09SP1|AL426289
(745 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1542 1450 0.0
>3x_Contig1542
Length = 13810
Score = 1450 bits (728), Expect = 0.0
Identities = 740/746 (99%), Gaps = 1/746 (0%)
Strand = Plus / Minus
Query: 1 attgttaccggacagaaagttgaaggctacggtaacaggatacaagaataggtgactgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1424 attgttaccggacagaaagttgaaggctacggtaacaggatacaagaataggtgactgat 1365
Query: 61 tgaacgaatctcttaattatattctctgtggattttttttattttattaggaatctcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1364 tgaacgaatctcttaattatattctctgtggattttttttattttattaggaatctcaaa 1305
Query: 121 gagatttggatctaaggtatggmagctgatggcagtsagtccttaattaagagtgaaatg 180
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 1304 gagatttggatctaaggtatggaagctgatggcagtgagtccttaattaagagtgaaatg 1245
Query: 181 gactccggtagaaacatgaataacagtmacaataacgccctgggggsg-ttggagtatct 239
||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||
Sbjct: 1244 gactccggtagaaacatgaataacagtaacaataacgccctgggggcggttggagtatct 1185
Query: 240 ataccttttccggaagatcttttgggtgtaccacaagattccttgaacggtgctggggcg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1184 ataccttttccggaagatcttttgggtgtaccacaagattccttgaacggtgctggggcg 1125
Query: 300 ggcccagcatcccaaggtgtgcctaattaccctcaggcaggaattcctggtgctgcacca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1124 ggcccagcatcccaaggtgtgcctaattaccctcaggcaggaattcctggtgctgcacca 1065
Query: 360 tcgtcatctggagtgtccccagctacaggtaatgtgaatgccaacggacatcgtgattct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1064 tcgtcatctggagtgtccccagctacaggtaatgtgaatgccaacggacatcgtgattct 1005
Query: 420 agcggacaaacacctgtacaaggtggacaaatttcacaaaacgtgaacyatcatcctgcc 479
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1004 agcggacaaacacctgtacaaggtggacaaatttcacaaaacgtgaactatcatcctgcc 945
Query: 480 gggatacaaggatctgcagctgagctgaacttcggaaatggtccctctctggcagaagaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 gggatacaaggatctgcagctgagctgaacttcggaaatggtccctctctggcagaagaa 885
Query: 540 acttcgaaatatattcacagcagaatggcaaatcagaactttgccatgttcccatcatac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 acttcgaaatatattcacagcagaatggcaaatcagaactttgccatgttcccatcatac 825
Query: 600 atgcagacccatagtttaatggacccttctatccaggaatcactatctcctttcttccaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 atgcagacccatagtttaatggacccttctatccaggaatcactatctcctttcttccaa 765
Query: 660 ccgttcggggttgacgcgtcacattttccaatgaccaacccacctatcttccagagtgca 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 ccgttcggggttgacgcgtcacattttccaatgaccaacccacctatcttccagagtgca 705
Query: 720 ttggcaacggattcgtttaacccaag 745
||||||||||||||||||||||||||
Sbjct: 704 ttggcaacggattcgtttaacccaag 679
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4623
Number of Sequences: 1807
Number of extensions: 4623
Number of successful extensions: 124
Number of sequences better than 1.0e-20: 1
length of query: 745
length of database: 10,358,551
effective HSP length: 16
effective length of query: 729
effective length of database: 10,329,639
effective search space: 7530306831
effective search space used: 7530306831
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)